IL_7UVY_180

3D structure

PDB id

7UVY (explore in PDB, NAKB, or RNA 3D Hub)

Description

A. baumannii ribosome-Streptothricin-D complex: 70S with P-site tRNA

Experimental method

ELECTRON MICROSCOPY

Resolution

2.39 Å

Loop

Sequence

UUAAUUGAUG*UUGAUCGAAG

Length

20 nucleotides

Bulged bases

None detected

QA status

Valid loop

Sequence variability

If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.

R3DSVS

Structural variability across Equivalence Class

The link below will give the loop's structural variability across the equivalence class for this chain.

R3DMCS EC

Structural variability across Rfam

If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.

R3DMCS Rfam

IL_7UVY_180 not in the Motif Atlas

Homologous match to IL_5J7L_387

Geometric discrepancy: 0.1047

The information below is about IL_5J7L_387

Detailed Annotation

No text annotation

Broad Annotation

No text annotation

Motif group

IL_61249.1

Basepair signature

cWW-L-R-L-R-tHS-cWW-cWW-tSH-tHS-cWW-cWW

Number of instances in this motif group

1

Unit IDs

7UVY|1|A|U|1847
7UVY|1|A|U|1848
7UVY|1|A|A|1849
7UVY|1|A|A|1850
7UVY|1|A|U|1851
7UVY|1|A|U|1852
7UVY|1|A|G|1853
7UVY|1|A|A|1854
7UVY|1|A|U|1855
7UVY|1|A|G|1856
*
7UVY|1|A|U|1878
7UVY|1|A|U|1879
7UVY|1|A|G|1880
7UVY|1|A|A|1881
7UVY|1|A|U|1882
7UVY|1|A|C|1883
7UVY|1|A|G|1884
7UVY|1|A|A|1885
7UVY|1|A|A|1886
7UVY|1|A|G|1887

Current chains

Chain A

23s ribosomal RNA

Nearby chains