IL_7UVZ_167

3D structure

PDB id

7UVZ (explore in PDB, NAKB, or RNA 3D Hub)

Description

A. baumannii ribosome-Streptothricin-D complex: 70S with E-site tRNA

Experimental method

ELECTRON MICROSCOPY

Resolution

2.21 Å

Loop

Sequence

CGGAUU*AUGAAG

Length

12 nucleotides

Bulged bases

None detected

QA status

Valid loop

Sequence variability

If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.

R3DSVS

Structural variability across Equivalence Class

The link below will give the loop's structural variability across the equivalence class for this chain.

R3DMCS EC

Structural variability across Rfam

If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.

R3DMCS Rfam

IL_7UVZ_167 not in the Motif Atlas

Homologous match to IL_4LFB_055

Geometric discrepancy: 0.0944

The information below is about IL_4LFB_055

Detailed Annotation

No text annotation

Broad Annotation

No text annotation

Motif group

IL_57885.2

Basepair signature

cWW-tSH-tSH-tHS-cWW-cWW

Number of instances in this motif group

7

Unit IDs

7UVZ|1|a|C|1300
7UVZ|1|a|G|1301
7UVZ|1|a|G|1302
7UVZ|1|a|A|1303
7UVZ|1|a|U|1304
7UVZ|1|a|U|1305
*
7UVZ|1|a|A|1326
7UVZ|1|a|U|1327
7UVZ|1|a|G|1328
7UVZ|1|a|A|1329
7UVZ|1|a|A|1330
7UVZ|1|a|G|1331

Current chains

Chain a

16s Ribosomal RNA

Nearby chains

Chain m

30S ribosomal protein S13