IL_7UW1_028
3D structure
- PDB id
- 7UW1 (explore in PDB, NAKB, or RNA 3D Hub)
- Description
- A. baumannii 70S ribosome-Streptothricin-D complex
- Experimental method
- ELECTRON MICROSCOPY
- Resolution
- 2.21 Å
Loop
- Sequence
- GGGGUAG*CGAAUAC
- Length
- 14 nucleotides
- Bulged bases
- None detected
- QA status
- Valid loop
Sequence variability
-
If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.
- R3DSVS
Structural variability across Equivalence Class
-
The link below will give the loop's structural variability across the equivalence class for this chain.
- R3DMCS EC
Structural variability across Rfam
-
If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.
- R3DMCS Rfam
- IL_7UW1_028 not in the Motif Atlas
- Geometric match to IL_5J7L_270
- Geometric discrepancy: 0.0722
- The information below is about IL_5J7L_270
- Detailed Annotation
- 7x7 Sarcin-Ricin with intercalated A; G-bulge
- Broad Annotation
- Sarcin-Ricin; G-bulge
- Motif group
- IL_29198.2
- Basepair signature
- cWW-cWW-L-R-cSH-R-tWH-tHS-cWW
- Number of instances in this motif group
- 4
Unit IDs
7UW1|1|A|G|854
7UW1|1|A|G|855
7UW1|1|A|G|856
7UW1|1|A|G|857
7UW1|1|A|U|858
7UW1|1|A|A|859
7UW1|1|A|G|860
*
7UW1|1|A|C|913
7UW1|1|A|G|914
7UW1|1|A|A|915
7UW1|1|A|A|916
7UW1|1|A|U|917
7UW1|1|A|A|918
7UW1|1|A|C|919
Current chains
- Chain A
- 23s ribosomal RNA
Nearby chains
- Chain B
- 5S ribosomal RNA; 5S rRNA
- Chain L
- 50S ribosomal protein L16
- Chain V
- 50S ribosomal protein L27
- Chain Y
- 50S ribosomal protein L30
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