IL_7UW1_167

3D structure

PDB id

7UW1 (explore in PDB, NAKB, or RNA 3D Hub)

Description

A. baumannii 70S ribosome-Streptothricin-D complex

Experimental method

ELECTRON MICROSCOPY

Resolution

2.21 Å

Loop

Sequence

CGGAUU*AUGAAG

Length

12 nucleotides

Bulged bases

None detected

QA status

Valid loop

Sequence variability

If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.

R3DSVS

Structural variability across Equivalence Class

The link below will give the loop's structural variability across the equivalence class for this chain.

R3DMCS EC

Structural variability across Rfam

If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.

R3DMCS Rfam

IL_7UW1_167 not in the Motif Atlas

Geometric match to IL_4LFB_055

Geometric discrepancy: 0.1008

The information below is about IL_4LFB_055

Detailed Annotation

No text annotation

Broad Annotation

No text annotation

Motif group

IL_57885.3

Basepair signature

cWW-tSH-tSH-tHS-cWW-cWW

Number of instances in this motif group

8

Unit IDs

7UW1|1|a|C|1300
7UW1|1|a|G|1301
7UW1|1|a|G|1302
7UW1|1|a|A|1303
7UW1|1|a|U|1304
7UW1|1|a|U|1305
*
7UW1|1|a|A|1326
7UW1|1|a|U|1327
7UW1|1|a|G|1328
7UW1|1|a|A|1329
7UW1|1|a|A|1330
7UW1|1|a|G|1331

Current chains

Chain a

16s Ribosomal RNA

Nearby chains

Chain m

30S ribosomal protein S13