IL_7UW1_176

3D structure

PDB id

7UW1 (explore in PDB, NAKB, or RNA 3D Hub)

Description

A. baumannii 70S ribosome-Streptothricin-D complex

Experimental method

ELECTRON MICROSCOPY

Resolution

2.21 Å

Loop

Sequence

UAG*CG

Length

5 nucleotides

Bulged bases

None detected

QA status

Valid loop

Sequence variability

If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.

R3DSVS

Structural variability across Equivalence Class

The link below will give the loop's structural variability across the equivalence class for this chain.

R3DMCS EC

Structural variability across Rfam

If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.

R3DMCS Rfam

IL_7UW1_176 not in the Motif Atlas

Geometric match to IL_4WF9_078

Geometric discrepancy: 0.202

The information below is about IL_4WF9_078

Detailed Annotation

Major groove platform

Broad Annotation

No text annotation

Motif group

IL_48076.9

Basepair signature

cWW-cSH-cWW

Number of instances in this motif group

44

Unit IDs

7UW1|1|a|U|1437
7UW1|1|a|A|1438
7UW1|1|a|G|1439
*
7UW1|1|a|C|1457
7UW1|1|a|G|1458

Current chains

Chain a

16s Ribosomal RNA

Nearby chains

Chain O

50S ribosomal protein L19

Chain t

30S ribosomal protein S20