IL_7UW1_181

3D structure

PDB id

7UW1 (explore in PDB, NAKB, or RNA 3D Hub)

Description

A. baumannii 70S ribosome-Streptothricin-D complex

Experimental method

ELECTRON MICROSCOPY

Resolution

2.21 Å

Loop

Sequence

GAAGG*CCC

Length

8 nucleotides

Bulged bases

None detected

QA status

Valid loop

Sequence variability

If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.

R3DSVS

Structural variability across Equivalence Class

The link below will give the loop's structural variability across the equivalence class for this chain.

R3DMCS EC

Structural variability across Rfam

If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.

R3DMCS Rfam

IL_7UW1_181 not in the Motif Atlas

Geometric match to IL_6M0X_001

Geometric discrepancy: 0.2042

The information below is about IL_6M0X_001

Detailed Annotation

No text annotation

Broad Annotation

No text annotation

Motif group

IL_70784.2

Basepair signature

cWW-cWW-L-cWW-L

Number of instances in this motif group

7

Unit IDs

7UW1|1|A|G|1842
7UW1|1|A|A|1843
7UW1|1|A|A|1844
7UW1|1|A|G|1845
7UW1|1|A|G|1846
*
7UW1|1|A|C|1888
7UW1|1|A|C|1889
7UW1|1|A|C|1890

Current chains

Chain A

23s ribosomal RNA

Nearby chains

Chain C

50S ribosomal protein L2

Chain a

Small subunit ribosomal RNA; SSU rRNA