IL_7V2M_041
3D structure
- PDB id
- 7V2M (explore in PDB, NAKB, or RNA 3D Hub)
- Description
- T.thermophilus 30S ribosome with KsgA, class K1k4
- Experimental method
- ELECTRON MICROSCOPY
- Resolution
- 3.4 Å
Loop
- Sequence
- CUGCAU*AUGG
- Length
- 10 nucleotides
- Bulged bases
- 7V2M|1|A|C|1037
- QA status
- Valid loop
Sequence variability
-
If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.
- R3DSVS
Structural variability across Equivalence Class
-
The link below will give the loop's structural variability across the equivalence class for this chain.
- R3DMCS EC
Structural variability across Rfam
-
If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.
- R3DMCS Rfam
- IL_7V2M_041 not in the Motif Atlas
- Geometric match to IL_4V88_473
- Geometric discrepancy: 0.3303
- The information below is about IL_4V88_473
- Detailed Annotation
- Tandem non-canonical cWW pairs
- Broad Annotation
- No text annotation
- Motif group
- IL_36174.1
- Basepair signature
- cWW-cWW-cWW-cWW
- Number of instances in this motif group
- 15
Unit IDs
7V2M|1|A|C|1034
7V2M|1|A|U|1035
7V2M|1|A|G|1036
7V2M|1|A|C|1037
7V2M|1|A|A|1038
7V2M|1|A|U|1039
*
7V2M|1|A|A|1186
7V2M|1|A|U|1187
7V2M|1|A|G|1188
7V2M|1|A|G|1189
Current chains
- Chain A
- 16s ribosomal RNA
Nearby chains
- Chain C
- 30S ribosomal protein S3
- Chain J
- 30S ribosomal protein S10
- Chain N
- 30S ribosomal protein S14 type Z
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