IL_7V2M_048
3D structure
- PDB id
- 7V2M (explore in PDB, NAKB, or RNA 3D Hub)
- Description
- T.thermophilus 30S ribosome with KsgA, class K1k4
- Experimental method
- ELECTRON MICROSCOPY
- Resolution
- 3.4 Å
Loop
- Sequence
- UACAAAG*CAAAAAG
- Length
- 14 nucleotides
- Bulged bases
- None detected
- QA status
- Valid loop
Sequence variability
-
If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.
- R3DSVS
Structural variability across Equivalence Class
-
The link below will give the loop's structural variability across the equivalence class for this chain.
- R3DMCS EC
Structural variability across Rfam
-
If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.
- R3DMCS Rfam
- IL_7V2M_048 not in the Motif Atlas
- Homologous match to IL_4LFB_051
- Geometric discrepancy: 0.1435
- The information below is about IL_4LFB_051
- Detailed Annotation
- No text annotation
- Broad Annotation
- No text annotation
- Motif group
- IL_09129.2
- Basepair signature
- cWW-L-R-tWH-L-R-L-tWW-cWW
- Number of instances in this motif group
- 2
Unit IDs
7V2M|1|A|U|1229
7V2M|1|A|A|1230
7V2M|1|A|C|1231
7V2M|1|A|A|1232
7V2M|1|A|A|1233
7V2M|1|A|A|1234
7V2M|1|A|G|1235
*
7V2M|1|A|C|1266
7V2M|1|A|A|1267
7V2M|1|A|A|1268
7V2M|1|A|A|1269
7V2M|1|A|A|1270
7V2M|1|A|A|1271
7V2M|1|A|G|1272
Current chains
- Chain A
- 16s ribosomal RNA
Nearby chains
- Chain G
- 30S ribosomal protein S7
- Chain I
- 30S ribosomal protein S9
- Chain J
- 30S ribosomal protein S10
- Chain N
- 30S ribosomal protein S14 type Z
- Chain V
- 30S ribosomal protein Thx
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