IL_7V2N_033
3D structure
- PDB id
- 7V2N (explore in PDB, NAKB, or RNA 3D Hub)
- Description
- T.thermophilus 30S ribosome with KsgA, class K2
- Experimental method
- ELECTRON MICROSCOPY
- Resolution
- 3.6 Å
Loop
- Sequence
- UGAC*GUACA
- Length
- 9 nucleotides
- Bulged bases
- None detected
- QA status
- Valid loop
Sequence variability
-
If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.
- R3DSVS
Structural variability across Equivalence Class
-
The link below will give the loop's structural variability across the equivalence class for this chain.
- R3DMCS EC
Structural variability across Rfam
-
If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.
- R3DMCS Rfam
- IL_7V2N_033 not in the Motif Atlas
- Geometric match to IL_8GLP_328
- Geometric discrepancy: 0.3609
- The information below is about IL_8GLP_328
- Detailed Annotation
- No text annotation
- Broad Annotation
- No text annotation
- Motif group
- IL_20358.1
- Basepair signature
- cWW-L-R-L-cWW-cWW
- Number of instances in this motif group
- 2
Unit IDs
7V2N|1|A|U|899
7V2N|1|A|G|900
7V2N|1|A|A|901
7V2N|1|A|C|902
*
7V2N|1|A|G|1375
7V2N|1|A|U|1376
7V2N|1|A|A|1377
7V2N|1|A|C|1378
7V2N|1|A|A|1379
Current chains
- Chain A
- 16s ribosomal RNA
Nearby chains
- Chain E
- 30S ribosomal protein S5
- Chain U
- Ribosomal RNA small subunit methyltransferase A
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