IL_7V2N_043
3D structure
- PDB id
- 7V2N (explore in PDB, NAKB, or RNA 3D Hub)
- Description
- T.thermophilus 30S ribosome with KsgA, class K2
- Experimental method
- ELECTRON MICROSCOPY
- Resolution
- 3.6 Å
Loop
- Sequence
- GUUGC*GCACUC
- Length
- 11 nucleotides
- Bulged bases
- None detected
- QA status
- Valid loop
Sequence variability
-
If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.
- R3DSVS
Structural variability across Equivalence Class
-
The link below will give the loop's structural variability across the equivalence class for this chain.
- R3DMCS EC
Structural variability across Rfam
-
If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.
- R3DMCS Rfam
- IL_7V2N_043 not in the Motif Atlas
- Homologous match to IL_5J7L_051
- Geometric discrepancy: 0.4827
- The information below is about IL_5J7L_051
- Detailed Annotation
- No text annotation
- Broad Annotation
- No text annotation
- Motif group
- IL_06691.1
- Basepair signature
- cWW-cWS-L-R-L-R-cWW-L
- Number of instances in this motif group
- 2
Unit IDs
7V2N|1|A|G|1107
7V2N|1|A|U|1108
7V2N|1|A|U|1109
7V2N|1|A|G|1110
7V2N|1|A|C|1111
*
7V2N|1|A|G|1127
7V2N|1|A|C|1128
7V2N|1|A|A|1129
7V2N|1|A|C|1130
7V2N|1|A|U|1131
7V2N|1|A|C|1132
Current chains
- Chain A
- 16s ribosomal RNA
Nearby chains
- Chain I
- 30S ribosomal protein S9
- Chain J
- 30S ribosomal protein S10
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