IL_7V2N_048
3D structure
- PDB id
- 7V2N (explore in PDB, NAKB, or RNA 3D Hub)
- Description
- T.thermophilus 30S ribosome with KsgA, class K2
- Experimental method
- ELECTRON MICROSCOPY
- Resolution
- 3.6 Å
Loop
- Sequence
- CAC*GG
- Length
- 5 nucleotides
- Bulged bases
- None detected
- QA status
- Valid loop
Sequence variability
-
If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.
- R3DSVS
Structural variability across Equivalence Class
-
The link below will give the loop's structural variability across the equivalence class for this chain.
- R3DMCS EC
Structural variability across Rfam
-
If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.
- R3DMCS Rfam
- IL_7V2N_048 not in the Motif Atlas
- Homologous match to IL_4LFB_054
- Geometric discrepancy: 0.2488
- The information below is about IL_4LFB_054
- Detailed Annotation
- Minor groove platform
- Broad Annotation
- No text annotation
- Motif group
- IL_51454.3
- Basepair signature
- cWW-cSH-cWW
- Number of instances in this motif group
- 45
Unit IDs
7V2N|1|A|C|1242
7V2N|1|A|A|1243
7V2N|1|A|C|1244
*
7V2N|1|A|G|1255
7V2N|1|A|G|1256
Current chains
- Chain A
- 16s ribosomal RNA
Nearby chains
- Chain V
- 30S ribosomal protein Thx
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