IL_7V2N_053
3D structure
- PDB id
- 7V2N (explore in PDB, NAKB, or RNA 3D Hub)
- Description
- T.thermophilus 30S ribosome with KsgA, class K2
- Experimental method
- ELECTRON MICROSCOPY
- Resolution
- 3.6 Å
Loop
- Sequence
- UGUGG*CACACG
- Length
- 11 nucleotides
- Bulged bases
- 7V2N|1|A|A|1209
- QA status
- Valid loop
Sequence variability
-
If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.
- R3DSVS
Structural variability across Equivalence Class
-
The link below will give the loop's structural variability across the equivalence class for this chain.
- R3DMCS EC
Structural variability across Rfam
-
If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.
- R3DMCS Rfam
- IL_7V2N_053 not in the Motif Atlas
- Geometric match to IL_7VYX_008
- Geometric discrepancy: 0.3254
- The information below is about IL_7VYX_008
- Detailed Annotation
- Partly complementary
- Broad Annotation
- Partly complementary
- Motif group
- IL_71154.2
- Basepair signature
- cWW-cWW-cWW-cWW-cWW
- Number of instances in this motif group
- 15
Unit IDs
7V2N|1|A|U|928
7V2N|1|A|G|929
7V2N|1|A|U|930
7V2N|1|A|G|931
7V2N|1|A|G|932
*
7V2N|1|A|C|1208
7V2N|1|A|A|1209
7V2N|1|A|C|1210
7V2N|1|A|A|1211
7V2N|1|A|C|1212
7V2N|1|A|G|1213
Current chains
- Chain A
- 16s ribosomal RNA
Nearby chains
- Chain I
- 30S ribosomal protein S9
- Chain M
- 30S ribosomal protein S13
- Chain S
- 30S ribosomal protein S19
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