IL_7V2O_003
3D structure
- PDB id
- 7V2O (explore in PDB, NAKB, or RNA 3D Hub)
- Description
- T.thermophilus 30S ribosome with KsgA, class K4
- Experimental method
- ELECTRON MICROSCOPY
- Resolution
- 3.5 Å
Loop
- Sequence
- CCUAAG*UAG
- Length
- 9 nucleotides
- Bulged bases
- 7V2O|1|A|C|49, 7V2O|1|A|A|52
- QA status
- Valid loop
Sequence variability
-
If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.
- R3DSVS
Structural variability across Equivalence Class
-
The link below will give the loop's structural variability across the equivalence class for this chain.
- R3DMCS EC
Structural variability across Rfam
-
If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.
- R3DMCS Rfam
- IL_7V2O_003 not in the Motif Atlas
- Geometric match to IL_4LFB_003
- Geometric discrepancy: 0.1347
- The information below is about IL_4LFB_003
- Detailed Annotation
- No text annotation
- Broad Annotation
- No text annotation
- Motif group
- IL_14177.2
- Basepair signature
- cWW-L-R-L-cWW
- Number of instances in this motif group
- 2
Unit IDs
7V2O|1|A|C|48
7V2O|1|A|C|49
7V2O|1|A|U|50
7V2O|1|A|A|51
7V2O|1|A|A|52
7V2O|1|A|G|53
*
7V2O|1|A|U|355
7V2O|1|A|A|356
7V2O|1|A|G|357
Current chains
- Chain A
- 16s ribosomal RNA
Nearby chains
- Chain L
- 30S ribosomal protein S12
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