IL_7V2P_031
3D structure
- PDB id
- 7V2P (explore in PDB, NAKB, or RNA 3D Hub)
- Description
- T.thermophilus 30S ribosome with KsgA, class K5
- Experimental method
- ELECTRON MICROSCOPY
- Resolution
- 3.3 Å
Loop
- Sequence
- GAGUAG*CGCAGAUAC
- Length
- 15 nucleotides
- Bulged bases
- 7V2P|1|A|A|686
- QA status
- Valid loop
Sequence variability
-
If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.
- R3DSVS
Structural variability across Equivalence Class
-
The link below will give the loop's structural variability across the equivalence class for this chain.
- R3DMCS EC
Structural variability across Rfam
-
If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.
- R3DMCS Rfam
- IL_7V2P_031 not in the Motif Atlas
- Homologous match to IL_4LFB_031
- Geometric discrepancy: 0.1176
- The information below is about IL_4LFB_031
- Detailed Annotation
- Kink-turn
- Broad Annotation
- No text annotation
- Motif group
- IL_95727.1
- Basepair signature
- cWW-L-tSH-L-tHW-tHS-R-cWW-L
- Number of instances in this motif group
- 1
Unit IDs
7V2P|1|A|G|667
7V2P|1|A|A|668
7V2P|1|A|G|669
7V2P|1|A|U|670
7V2P|1|A|A|671
7V2P|1|A|G|672
*
7V2P|1|A|C|683
7V2P|1|A|G|684
7V2P|1|A|C|685
7V2P|1|A|A|686
7V2P|1|A|G|687
7V2P|1|A|A|688
7V2P|1|A|U|689
7V2P|1|A|A|690
7V2P|1|A|C|691
Current chains
- Chain A
- 16s ribosomal RNA
Nearby chains
- Chain K
- 30S ribosomal protein S11
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