IL_7WTL_020
3D structure
- PDB id
- 7WTL (explore in PDB, NAKB, or RNA 3D Hub)
- Description
- Cryo-EM structure of a yeast pre-40S ribosomal subunit - State Dis-D
- Experimental method
- ELECTRON MICROSCOPY
- Resolution
- 3.3 Å
Loop
- Sequence
- GGG*CGAUUC
- Length
- 9 nucleotides
- Bulged bases
- 7WTL|1|C2|U|380
- QA status
- Valid loop
Sequence variability
-
If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.
- R3DSVS
Structural variability across Equivalence Class
-
The link below will give the loop's structural variability across the equivalence class for this chain.
- R3DMCS EC
Structural variability across Rfam
-
If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.
- R3DMCS Rfam
- IL_7WTL_020 not in the Motif Atlas
- Geometric match to IL_4V88_404
- Geometric discrepancy: 0.0961
- The information below is about IL_4V88_404
- Detailed Annotation
- No text annotation
- Broad Annotation
- No text annotation
- Motif group
- IL_11347.3
- Basepair signature
- cWW-L-R-L-cWW-L
- Number of instances in this motif group
- 2
Unit IDs
7WTL|1|C2|G|363
7WTL|1|C2|G|364
7WTL|1|C2|G|365
*
7WTL|1|C2|C|376
7WTL|1|C2|G|377
7WTL|1|C2|A|378
7WTL|1|C2|U|379
7WTL|1|C2|U|380
7WTL|1|C2|C|381
Current chains
- Chain C2
- 18S rRNA
Nearby chains
- Chain CL
- Ribosome biogenesis protein BMS1
- Chain SE
- 40S ribosomal protein S4-A
- Chain SJ
- 40S ribosomal protein S9-A
- Chain SX
- 40S ribosomal protein S23-A
Coloring options: