IL_7WTR_061

3D structure

PDB id

7WTR (explore in PDB, NAKB, or RNA 3D Hub)

Description

Cryo-EM structure of a yeast pre-40S ribosomal subunit - State Tsr1-3

Experimental method

ELECTRON MICROSCOPY

Resolution

3.5 Å

Loop

Sequence

CGCCCG*CGUAACAAG

Length

15 nucleotides

Bulged bases

None detected

QA status

Unknown status

Sequence variability

If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.

R3DSVS

Structural variability across Equivalence Class

The link below will give the loop's structural variability across the equivalence class for this chain.

R3DMCS EC

Structural variability across Rfam

If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.

R3DMCS Rfam

Detailed Annotation

No text annotation

Broad Annotation

No text annotation

Motif group

Not in a motif group

Basepair signature

Not available

Number of instances in this motif group

0

Unit IDs

7WTR|1|C2|C|1637
7WTR|1|C2|G|1638
7WTR|1|C2|C|1639
7WTR|1|C2|C|1640
7WTR|1|C2|C|1641
7WTR|1|C2|G|1642
*
7WTR|1|C2|C|1759
7WTR|1|C2|G|1760
7WTR|1|C2|U|1761
7WTR|1|C2|A|1762
7WTR|1|C2|A|1763
7WTR|1|C2|C|1764
7WTR|1|C2|A|1765
7WTR|1|C2|A|1766
7WTR|1|C2|G|1767

Current chains

Chain C2

18S rRNA

Nearby chains

Chain CC

Ribosome biogenesis protein TSR1