IL_7WTU_056
3D structure
- PDB id
- 7WTU (explore in PDB, NAKB, or RNA 3D Hub)
- Description
- Cryo-EM structure of a human pre-40S ribosomal subunit - State RRP12-A1 (without CK1)
- Experimental method
- ELECTRON MICROSCOPY
- Resolution
- 3 Å
Loop
- Sequence
- GCG*CC
- Length
- 5 nucleotides
- Bulged bases
- None detected
- QA status
- Valid loop
Sequence variability
-
If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.
- R3DSVS
Structural variability across Equivalence Class
-
The link below will give the loop's structural variability across the equivalence class for this chain.
- R3DMCS EC
Structural variability across Rfam
-
If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.
- R3DMCS Rfam
- IL_7WTU_056 not in the Motif Atlas
- Geometric match to IL_7RQB_058
- Geometric discrepancy: 0.2532
- The information below is about IL_7RQB_058
- Detailed Annotation
- Single stack bend
- Broad Annotation
- Single stack bend
- Motif group
- IL_76488.4
- Basepair signature
- cWW-L-cWW
- Number of instances in this motif group
- 36
Unit IDs
7WTU|1|2|G|1108
7WTU|1|2|C|1109
7WTU|1|2|G|1110
*
7WTU|1|2|C|1123
7WTU|1|2|C|1124
Current chains
- Chain 2
- 18S rRNA
Nearby chains
- Chain B
- 40S ribosomal protein S3a
- Chain b
- 40S ribosomal protein S27
Coloring options: