IL_7WTU_068

3D structure

PDB id

7WTU (explore in PDB, NAKB, or RNA 3D Hub)

Description

Cryo-EM structure of a human pre-40S ribosomal subunit - State RRP12-A1 (without CK1)

Experimental method

ELECTRON MICROSCOPY

Resolution

3 Å

Loop

Sequence

UGC*GAUG

Length

7 nucleotides

Bulged bases

7WTU|1|2|A|1498

QA status

Unknown status

Sequence variability

If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.

R3DSVS

Structural variability across Equivalence Class

The link below will give the loop's structural variability across the equivalence class for this chain.

R3DMCS EC

Structural variability across Rfam

If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.

R3DMCS Rfam

IL_7WTU_068 not in the Motif Atlas

Geometric match to IL_7RQB_083

Geometric discrepancy: 0.2516

The information below is about IL_7RQB_083

Detailed Annotation

No text annotation

Broad Annotation

No text annotation

Motif group

IL_86319.2

Basepair signature

cWW-cWW-cWW

Number of instances in this motif group

270

Unit IDs

7WTU|1|2|U|1329
7WTU|1|2|G|1330
7WTU|1|2|C|1331
*
7WTU|1|2|G|1497
7WTU|1|2|A|1498
7WTU|1|2|U|1499
7WTU|1|2|G|1500

Current chains

Chain 2

18S rRNA

Nearby chains

Chain w

Bystin