IL_7WTV_032

3D structure

PDB id

7WTV (explore in PDB, NAKB, or RNA 3D Hub)

Description

Cryo-EM structure of a human pre-40S ribosomal subunit - State RRP12-A2

Experimental method

ELECTRON MICROSCOPY

Resolution

3.5 Å

Loop

Sequence

AGGGCAAG*CU

Length

10 nucleotides

Bulged bases

7WTV|1|2|G|601, 7WTV|1|2|G|602

QA status

Valid loop

Sequence variability

If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.

R3DSVS

Structural variability across Equivalence Class

The link below will give the loop's structural variability across the equivalence class for this chain.

R3DMCS EC

Structural variability across Rfam

If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.

R3DMCS Rfam

Detailed Annotation

No text annotation

Broad Annotation

No text annotation

Motif group

Not in a motif group

Basepair signature

Not available

Number of instances in this motif group

0

Unit IDs

7WTV|1|2|A|599
7WTV|1|2|G|600
7WTV|1|2|G|601
7WTV|1|2|G|602
7WTV|1|2|C|603
7WTV|1|2|A|604
7WTV|1|2|A|605
7WTV|1|2|G|606
*
7WTV|1|2|C|636
7WTV|1|2|U|637

Current chains

Chain 2

18S rRNA

Nearby chains

Chain C

40S ribosomal protein S2

Chain J

40S ribosomal protein S9

Chain X

40S ribosomal protein S23

Chain e

40S ribosomal protein S30

Chain q

Probable 18S rRNA (guanine-N(7))-methyltransferase