IL_7WTV_033
3D structure
- PDB id
- 7WTV (explore in PDB, NAKB, or RNA 3D Hub)
- Description
- Cryo-EM structure of a human pre-40S ribosomal subunit - State RRP12-A2
- Experimental method
- ELECTRON MICROSCOPY
- Resolution
- 3.5 Å
Loop
- Sequence
- GUC*GC
- Length
- 5 nucleotides
- Bulged bases
- 7WTV|1|2|U|607
- QA status
- Valid loop
Sequence variability
-
If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.
- R3DSVS
Structural variability across Equivalence Class
-
The link below will give the loop's structural variability across the equivalence class for this chain.
- R3DMCS EC
Structural variability across Rfam
-
If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.
- R3DMCS Rfam
- IL_7WTV_033 not in the Motif Atlas
- Geometric match to IL_6UFG_004
- Geometric discrepancy: 0.2844
- The information below is about IL_6UFG_004
- Detailed Annotation
- Single bulged U
- Broad Annotation
- No text annotation
- Motif group
- IL_97561.3
- Basepair signature
- cWW-L-cWW
- Number of instances in this motif group
- 147
Unit IDs
7WTV|1|2|G|606
7WTV|1|2|U|607
7WTV|1|2|C|608
*
7WTV|1|2|G|635
7WTV|1|2|C|636
Current chains
- Chain 2
- 18S rRNA
Nearby chains
- Chain J
- 40S ribosomal protein S9
- Chain X
- 40S ribosomal protein S23
- Chain e
- 40S ribosomal protein S30
- Chain q
- Probable 18S rRNA (guanine-N(7))-methyltransferase
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