IL_7WTV_063

3D structure

PDB id

7WTV (explore in PDB, NAKB, or RNA 3D Hub)

Description

Cryo-EM structure of a human pre-40S ribosomal subunit - State RRP12-A2

Experimental method

ELECTRON MICROSCOPY

Resolution

3.5 Å

Loop

Sequence

GAC*GGGU

Length

7 nucleotides

Bulged bases

7WTV|1|2|G|1321

QA status

Unknown status

Sequence variability

If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.

R3DSVS

Structural variability across Equivalence Class

The link below will give the loop's structural variability across the equivalence class for this chain.

R3DMCS EC

Structural variability across Rfam

If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.

R3DMCS Rfam

IL_7WTV_063 not in the Motif Atlas

Geometric match to IL_7A0S_092

Geometric discrepancy: 0.2554

The information below is about IL_7A0S_092

Detailed Annotation

Other IL

Broad Annotation

Other IL

Motif group

IL_10892.2

Basepair signature

cWW-cHW-cWW

Number of instances in this motif group

58

Unit IDs

7WTV|1|2|G|1275
7WTV|1|2|A|1276
7WTV|1|2|C|1277
*
7WTV|1|2|G|1320
7WTV|1|2|G|1321
7WTV|1|2|G|1322
7WTV|1|2|U|1323

Current chains

Chain 2

18S rRNA

Nearby chains

Chain w

Bystin