IL_7WTZ_004
3D structure
- PDB id
- 7WTZ (explore in PDB, NAKB, or RNA 3D Hub)
- Description
- Cryo-EM structure of a human pre-40S ribosomal subunit - State RRP12-B2
- Experimental method
- ELECTRON MICROSCOPY
- Resolution
- 3 Å
Loop
- Sequence
- GAUUAAG*CGC
- Length
- 10 nucleotides
- Bulged bases
- 7WTZ|1|2|A|46
- QA status
- Valid loop
Sequence variability
-
If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.
- R3DSVS
Structural variability across Equivalence Class
-
The link below will give the loop's structural variability across the equivalence class for this chain.
- R3DMCS EC
Structural variability across Rfam
-
If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.
- R3DMCS Rfam
- IL_7WTZ_004 not in the Motif Atlas
- Geometric match to IL_4V88_387
- Geometric discrepancy: 0.0741
- The information below is about IL_4V88_387
- Detailed Annotation
- No text annotation
- Broad Annotation
- No text annotation
- Motif group
- IL_77761.1
- Basepair signature
- cWW-L-R-L-cWW-L-L
- Number of instances in this motif group
- 2
Unit IDs
7WTZ|1|2|G|41
7WTZ|1|2|A|42
7WTZ|1|2|U|43
7WTZ|1|2|U|44
7WTZ|1|2|A|45
7WTZ|1|2|A|46
7WTZ|1|2|G|47
*
7WTZ|1|2|C|479
7WTZ|1|2|G|480
7WTZ|1|2|C|481
Current chains
- Chain 2
- 18S rRNA
Nearby chains
- Chain X
- 40S ribosomal protein S23
- Chain u
- Pre-rRNA-processing protein TSR1 homolog
Coloring options: