IL_7WTZ_093

3D structure

PDB id

7WTZ (explore in PDB, NAKB, or RNA 3D Hub)

Description

Cryo-EM structure of a human pre-40S ribosomal subunit - State RRP12-B2

Experimental method

ELECTRON MICROSCOPY

Resolution

3 Å

Loop

Sequence

CGGG*CUG

Length

7 nucleotides

Bulged bases

None detected

QA status

Unknown status

Sequence variability

If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.

R3DSVS

Structural variability across Equivalence Class

The link below will give the loop's structural variability across the equivalence class for this chain.

R3DMCS EC

Structural variability across Rfam

If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.

R3DMCS Rfam

IL_7WTZ_093 not in the Motif Atlas

Geometric match to IL_4WSM_372

Geometric discrepancy: 0.3223

The information below is about IL_4WSM_372

Detailed Annotation

No text annotation

Broad Annotation

No text annotation

Motif group

IL_16315.1

Basepair signature

cWW-cWW-L-cWW

Number of instances in this motif group

3

Unit IDs

7WTZ|1|2|C|1756
7WTZ|1|2|G|1757
7WTZ|1|2|G|1758
7WTZ|1|2|G|1759
*
7WTZ|1|2|C|1774
7WTZ|1|2|U|1775
7WTZ|1|2|G|1776

Current chains

Chain 2

18S rRNA

Nearby chains

Chain G

40S ribosomal protein S6