IL_7WU0_084
3D structure
- PDB id
- 7WU0 (explore in PDB, NAKB, or RNA 3D Hub)
- Description
- Cryo-EM structure of a human pre-40S ribosomal subunit - State RRP12-B3
- Experimental method
- ELECTRON MICROSCOPY
- Resolution
- 3.3 Å
Loop
- Sequence
- UAC*GAA
- Length
- 6 nucleotides
- Bulged bases
- None detected
- QA status
- Valid loop
Sequence variability
-
If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.
- R3DSVS
Structural variability across Equivalence Class
-
The link below will give the loop's structural variability across the equivalence class for this chain.
- R3DMCS EC
Structural variability across Rfam
-
If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.
- R3DMCS Rfam
- IL_7WU0_084 not in the Motif Atlas
- Geometric match to IL_5TBW_127
- Geometric discrepancy: 0.1608
- The information below is about IL_5TBW_127
- Detailed Annotation
- Isolated non-canonical cWW pair
- Broad Annotation
- No text annotation
- Motif group
- IL_44258.2
- Basepair signature
- cWW-cWW-cWW
- Number of instances in this motif group
- 301
Unit IDs
7WU0|1|2|U|1714
7WU0|1|2|A|1715
7WU0|1|2|C|1716
*
7WU0|1|2|G|1817
7WU0|1|2|A|1818
7WU0|1|2|A|1819
Current chains
- Chain 2
- 18S rRNA
Nearby chains
- Chain X
- 40S ribosomal protein S23
- Chain t
- Protein LTV1 homolog
- Chain u
- Pre-rRNA-processing protein TSR1 homolog
- Chain v
- Serine/threonine-protein kinase RIO2
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