IL_7XAM_064

3D structure

PDB id

7XAM (explore in PDB, NAKB, or RNA 3D Hub)

Description

Mycobacterium smegmatis 50S ribosomal subunit from Stationary phase of growth

Experimental method

ELECTRON MICROSCOPY

Resolution

3.5 Å

Loop

Sequence

GUAG*UGAUC

Length

9 nucleotides

Bulged bases

7XAM|1|A|U|1774

QA status

Valid loop

Sequence variability

If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.

R3DSVS

Structural variability across Equivalence Class

The link below will give the loop's structural variability across the equivalence class for this chain.

R3DMCS EC

Structural variability across Rfam

If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.

R3DMCS Rfam

IL_7XAM_064 not in the Motif Atlas

Homologous match to IL_7RQB_057

Geometric discrepancy: 0.1458

The information below is about IL_7RQB_057

Detailed Annotation

tSH-tHW

Broad Annotation

No text annotation

Motif group

IL_04059.1

Basepair signature

cWW-tWH-tHS-cWW

Number of instances in this motif group

13

Unit IDs

7XAM|1|A|G|1658
7XAM|1|A|U|1659
7XAM|1|A|A|1660
7XAM|1|A|G|1661
*
7XAM|1|A|U|1771
7XAM|1|A|G|1772
7XAM|1|A|A|1773
7XAM|1|A|U|1774
7XAM|1|A|C|1775

Current chains

Chain A

23S rRNA

Nearby chains