IL_7XAM_115
3D structure
- PDB id
- 7XAM (explore in PDB, NAKB, or RNA 3D Hub)
- Description
- Mycobacterium smegmatis 50S ribosomal subunit from Stationary phase of growth
- Experimental method
- ELECTRON MICROSCOPY
- Resolution
- 3.5 Å
Loop
- Sequence
- UGGAAG*UGCAG
- Length
- 11 nucleotides
- Bulged bases
- None detected
- QA status
- Valid loop
Sequence variability
-
If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.
- R3DSVS
Structural variability across Equivalence Class
-
The link below will give the loop's structural variability across the equivalence class for this chain.
- R3DMCS EC
Structural variability across Rfam
-
If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.
- R3DMCS Rfam
- IL_7XAM_115 not in the Motif Atlas
- Homologous match to IL_4WF9_108
- Geometric discrepancy: 0.1487
- The information below is about IL_4WF9_108
- Detailed Annotation
- tHS double platform
- Broad Annotation
- No text annotation
- Motif group
- IL_48489.1
- Basepair signature
- cWW-tSH-L-tHH-L-cWW
- Number of instances in this motif group
- 8
Unit IDs
7XAM|1|A|U|3068
7XAM|1|A|G|3069
7XAM|1|A|G|3070
7XAM|1|A|A|3071
7XAM|1|A|A|3072
7XAM|1|A|G|3073
*
7XAM|1|A|U|3086
7XAM|1|A|G|3087
7XAM|1|A|C|3088
7XAM|1|A|A|3089
7XAM|1|A|G|3090
Current chains
- Chain A
- 23S rRNA
Nearby chains
- Chain O
- 50S ribosomal protein L17
- Chain Q
- 50S ribosomal protein L19
Coloring options: