IL_7Y41_074

3D structure

PDB id

7Y41 (explore in PDB, NAKB, or RNA 3D Hub)

Description

Mycobacterium smegmatis 50S ribosomal subunit from Log Phase of growth

Experimental method

ELECTRON MICROSCOPY

Resolution

4.1 Å

Loop

Sequence

AG*CAUAUAU

Length

9 nucleotides

Bulged bases

7Y41|1|A|U|1730

QA status

Valid loop

Sequence variability

If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.

R3DSVS

Structural variability across Equivalence Class

The link below will give the loop's structural variability across the equivalence class for this chain.

R3DMCS EC

Structural variability across Rfam

If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.

R3DMCS Rfam

IL_7Y41_074 not in the Motif Atlas

Homologous match to IL_7RQB_061

Geometric discrepancy: 0.4864

The information below is about IL_7RQB_061

Detailed Annotation

No text annotation

Broad Annotation

No text annotation

Motif group

IL_52493.1

Basepair signature

cWW-L-cWW-L-L

Number of instances in this motif group

2

Unit IDs

7Y41|1|A|A|1702
7Y41|1|A|G|1703
*
7Y41|1|A|C|1726
7Y41|1|A|A|1727
7Y41|1|A|U|1728
7Y41|1|A|A|1729
7Y41|1|A|U|1730
7Y41|1|A|A|1731
7Y41|1|A|U|1732

Current chains

Chain A

23S ribosomal RNA

Nearby chains