IL_7Y7E_082
3D structure
- PDB id
- 7Y7E (explore in PDB, NAKB, or RNA 3D Hub)
- Description
- Structure of the Bacterial Ribosome with human tRNA Asp(ManQ34) and mRNA(GAU)
- Experimental method
- ELECTRON MICROSCOPY
- Resolution
- 2.41 Å
Loop
- Sequence
- GAAAC*GAGAUAGC
- Length
- 13 nucleotides
- Bulged bases
- 7Y7E|1|a|G|801, 7Y7E|1|a|G|805
- QA status
- Valid loop
Sequence variability
-
If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.
- R3DSVS
Structural variability across Equivalence Class
-
The link below will give the loop's structural variability across the equivalence class for this chain.
- R3DMCS EC
Structural variability across Rfam
-
If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.
- R3DMCS Rfam
- IL_7Y7E_082 not in the Motif Atlas
- Homologous match to IL_5J7L_260
- Geometric discrepancy: 0.0731
- The information below is about IL_5J7L_260
- Detailed Annotation
- tHW-tHW cross-strand stack
- Broad Annotation
- No text annotation
- Motif group
- IL_54041.2
- Basepair signature
- cWW-L-R-L-R-tWH-L-cWW
- Number of instances in this motif group
- 7
Unit IDs
7Y7E|1|a|G|674
7Y7E|1|a|A|675
7Y7E|1|a|A|676
7Y7E|1|a|A|677
7Y7E|1|a|C|678
*
7Y7E|1|a|G|799
7Y7E|1|a|A|800
7Y7E|1|a|G|801
7Y7E|1|a|A|802
7Y7E|1|a|U|803
7Y7E|1|a|A|804
7Y7E|1|a|G|805
7Y7E|1|a|C|806
Current chains
- Chain a
- 23S rRNA
Nearby chains
- Chain e
- 50S ribosomal protein L4
- Chain k
- 50S ribosomal protein L15
Coloring options: