IL_7Y7G_082

3D structure

PDB id

7Y7G (explore in PDB, NAKB, or RNA 3D Hub)

Description

Structure of the Bacterial Ribosome with human tRNA Tyr(GalQ34) and mRNA(UAU)

Experimental method

ELECTRON MICROSCOPY

Resolution

2.34 Å

Loop

Sequence

GAAAC*GAGAUAGC

Length

13 nucleotides

Bulged bases

7Y7G|1|a|G|801, 7Y7G|1|a|G|805

QA status

Valid loop

Sequence variability

If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.

R3DSVS

Structural variability across Equivalence Class

The link below will give the loop's structural variability across the equivalence class for this chain.

R3DMCS EC

Structural variability across Rfam

If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.

R3DMCS Rfam

IL_7Y7G_082 not in the Motif Atlas

Geometric match to IL_5J7L_260

Geometric discrepancy: 0.0661

The information below is about IL_5J7L_260

Detailed Annotation

tHW-tHW cross-strand stack

Broad Annotation

No text annotation

Motif group

IL_54041.2

Basepair signature

cWW-L-R-L-R-tWH-L-cWW

Number of instances in this motif group

7

Unit IDs

7Y7G|1|a|G|674
7Y7G|1|a|A|675
7Y7G|1|a|A|676
7Y7G|1|a|A|677
7Y7G|1|a|C|678
*
7Y7G|1|a|G|799
7Y7G|1|a|A|800
7Y7G|1|a|G|801
7Y7G|1|a|A|802
7Y7G|1|a|U|803
7Y7G|1|a|A|804
7Y7G|1|a|G|805
7Y7G|1|a|C|806

Current chains

Chain a

23S rRNA

Nearby chains

Chain e

50S ribosomal protein L4

Chain k

50S ribosomal protein L15