IL_7Y7G_087

3D structure

PDB id

7Y7G (explore in PDB, NAKB, or RNA 3D Hub)

Description

Structure of the Bacterial Ribosome with human tRNA Tyr(GalQ34) and mRNA(UAU)

Experimental method

ELECTRON MICROSCOPY

Resolution

2.34 Å

Loop

Sequence

GGG*CAAUC

Length

8 nucleotides

Bulged bases

7Y7G|1|a|G|776, 7Y7G|1|a|A|788, 7Y7G|1|a|A|789

QA status

Valid loop

Sequence variability

If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.

R3DSVS

Structural variability across Equivalence Class

The link below will give the loop's structural variability across the equivalence class for this chain.

R3DMCS EC

Structural variability across Rfam

If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.

R3DMCS Rfam

IL_7Y7G_087 not in the Motif Atlas

Geometric match to IL_5J7L_265

Geometric discrepancy: 0.0825

The information below is about IL_5J7L_265

Detailed Annotation

Multiple bulged bases

Broad Annotation

No text annotation

Motif group

IL_06549.2

Basepair signature

cWW-cWW

Number of instances in this motif group

6

Unit IDs

7Y7G|1|a|G|775
7Y7G|1|a|G|776
7Y7G|1|a|G|777
*
7Y7G|1|a|C|787
7Y7G|1|a|A|788
7Y7G|1|a|A|789
7Y7G|1|a|U|790
7Y7G|1|a|C|791

Current chains

Chain a

23S rRNA

Nearby chains

Chain 1

50S ribosomal protein L34

Chain c

50S ribosomal protein L2

Chain r

50S ribosomal protein L22