3D structure

PDB id
7Y7G (explore in PDB, NAKB, or RNA 3D Hub)
Description
Structure of the Bacterial Ribosome with human tRNA Tyr(GalQ34) and mRNA(UAU)
Experimental method
ELECTRON MICROSCOPY
Resolution
2.34 Å

Loop

Sequence
CUAGUAC*GGACCG
Length
13 nucleotides
Bulged bases
None detected
QA status
Valid loop

Sequence variability

If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.
R3DSVS

Structural variability across Equivalence Class

The link below will give the loop's structural variability across the equivalence class for this chain.
R3DMCS EC

Structural variability across Rfam

If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.
R3DMCS Rfam
IL_7Y7G_162 not in the Motif Atlas
Geometric match to IL_7A0S_094
Geometric discrepancy: 0.0741
The information below is about IL_7A0S_094
Detailed Annotation
Sarcin-Ricin target in LSU H95; G-bulge
Broad Annotation
Sarcin-Ricin; G-bulge
Motif group
IL_16458.4
Basepair signature
cWW-L-R-L-R-cSH-tWH-tHS-cWW
Number of instances in this motif group
5

Unit IDs

7Y7G|1|a|C|2652
7Y7G|1|a|U|2653
7Y7G|1|a|A|2654
7Y7G|1|a|G|2655
7Y7G|1|a|U|2656
7Y7G|1|a|A|2657
7Y7G|1|a|C|2658
*
7Y7G|1|a|G|2663
7Y7G|1|a|G|2664
7Y7G|1|a|A|2665
7Y7G|1|a|C|2666
7Y7G|1|a|C|2667
7Y7G|1|a|G|2668

Current chains

Chain a
23S rRNA

Nearby chains

Chain g
50S ribosomal protein L6

Coloring options:


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