IL_7YLA_027
3D structure
- PDB id
- 7YLA (explore in PDB, NAKB, or RNA 3D Hub)
- Description
- Cryo-EM structure of 50S-HflX complex
- Experimental method
- ELECTRON MICROSCOPY
- Resolution
- 2.52 Å
Loop
- Sequence
- GCACU*AAAC
- Length
- 9 nucleotides
- Bulged bases
- None detected
- QA status
- Valid loop
Sequence variability
-
If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.
- R3DSVS
Structural variability across Equivalence Class
-
The link below will give the loop's structural variability across the equivalence class for this chain.
- R3DMCS EC
Structural variability across Rfam
-
If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.
- R3DMCS Rfam
- IL_7YLA_027 not in the Motif Atlas
- Homologous match to IL_5J7L_272
- Geometric discrepancy: 0.0848
- The information below is about IL_5J7L_272
- Detailed Annotation
- C-loop with bulged stacked A's
- Broad Annotation
- C-loop
- Motif group
- IL_26222.2
- Basepair signature
- cWW-cWS-cSH-tWH-R-L-R-cWW
- Number of instances in this motif group
- 6
Unit IDs
7YLA|1|I|G|864
7YLA|1|I|C|865
7YLA|1|I|A|866
7YLA|1|I|C|867
7YLA|1|I|U|868
*
7YLA|1|I|A|909
7YLA|1|I|A|910
7YLA|1|I|A|911
7YLA|1|I|C|912
Current chains
- Chain I
- Escherichia coli strain K-12 substr. MG1655_TMP32XR1 chromosome, complete genome
Nearby chains
- Chain J
- 5S ribosomal RNA; 5S rRNA
- Chain U
- 50S ribosomal protein L16
Coloring options: