IL_7YLA_046

3D structure

PDB id

7YLA (explore in PDB, NAKB, or RNA 3D Hub)

Description

Cryo-EM structure of 50S-HflX complex

Experimental method

ELECTRON MICROSCOPY

Resolution

2.52 Å

Loop

Sequence

CUAAG*CGAUG

Length

10 nucleotides

Bulged bases

None detected

QA status

Valid loop

Sequence variability

If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.

R3DSVS

Structural variability across Equivalence Class

The link below will give the loop's structural variability across the equivalence class for this chain.

R3DMCS EC

Structural variability across Rfam

If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.

R3DMCS Rfam

IL_7YLA_046 not in the Motif Atlas

Homologous match to IL_5J7L_292

Geometric discrepancy: 0.0731

The information below is about IL_5J7L_292

Detailed Annotation

UAA/GAN

Broad Annotation

UAA/GAN

Motif group

IL_89021.2

Basepair signature

cWW-L-R-L-R-tHS-cWW

Number of instances in this motif group

6

Unit IDs

7YLA|1|I|C|1351
7YLA|1|I|U|1352
7YLA|1|I|A|1353
7YLA|1|I|A|1354
7YLA|1|I|G|1355
*
7YLA|1|I|C|1376
7YLA|1|I|G|1377
7YLA|1|I|A|1378
7YLA|1|I|U|1379
7YLA|1|I|G|1380

Current chains

Chain I

Escherichia coli strain K-12 substr. MG1655_TMP32XR1 chromosome, complete genome

Nearby chains

Chain K

50S ribosomal protein L2

Chain k

50S ribosomal protein L34