IL_7YLA_053

3D structure

PDB id

7YLA (explore in PDB, NAKB, or RNA 3D Hub)

Description

Cryo-EM structure of 50S-HflX complex

Experimental method

ELECTRON MICROSCOPY

Resolution

2.52 Å

Loop

Sequence

UAAG*UGAUG

Length

9 nucleotides

Bulged bases

7YLA|1|I|U|1523

QA status

Valid loop

Sequence variability

If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.

R3DSVS

Structural variability across Equivalence Class

The link below will give the loop's structural variability across the equivalence class for this chain.

R3DMCS EC

Structural variability across Rfam

If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.

R3DMCS Rfam

IL_7YLA_053 not in the Motif Atlas

Homologous match to IL_5J7L_299

Geometric discrepancy: 0.1099

The information below is about IL_5J7L_299

Detailed Annotation

No text annotation

Broad Annotation

No text annotation

Motif group

IL_68574.4

Basepair signature

cWW-tHH-tHS-cWW

Number of instances in this motif group

3

Unit IDs

7YLA|1|I|U|1468
7YLA|1|I|A|1469
7YLA|1|I|A|1470
7YLA|1|I|G|1471
*
7YLA|1|I|U|1520
7YLA|1|I|G|1521
7YLA|1|I|A|1522
7YLA|1|I|U|1523
7YLA|1|I|G|1524

Current chains

Chain I

Escherichia coli strain K-12 substr. MG1655_TMP32XR1 chromosome, complete genome

Nearby chains