IL_7YLA_092
3D structure
- PDB id
- 7YLA (explore in PDB, NAKB, or RNA 3D Hub)
- Description
- Cryo-EM structure of 50S-HflX complex
- Experimental method
- ELECTRON MICROSCOPY
- Resolution
- 2.52 Å
Loop
- Sequence
- CUC*GCGAG
- Length
- 8 nucleotides
- Bulged bases
- 7YLA|1|I|G|2576, 7YLA|1|I|A|2577
- QA status
- Valid loop
Sequence variability
-
If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.
- R3DSVS
Structural variability across Equivalence Class
-
The link below will give the loop's structural variability across the equivalence class for this chain.
- R3DMCS EC
Structural variability across Rfam
-
If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.
- R3DMCS Rfam
- IL_7YLA_092 not in the Motif Atlas
- Geometric match to IL_5J7L_340
- Geometric discrepancy: 0.0806
- The information below is about IL_5J7L_340
- Detailed Annotation
- Isolated non-canonical cWW with bulges
- Broad Annotation
- Isolated non-canonical cWW with bulges
- Motif group
- IL_07785.1
- Basepair signature
- cWW-cWW-cWW
- Number of instances in this motif group
- 33
Unit IDs
7YLA|1|I|C|2510
7YLA|1|I|U|2511
7YLA|1|I|C|2512
*
7YLA|1|I|G|2574
7YLA|1|I|C|2575
7YLA|1|I|G|2576
7YLA|1|I|A|2577
7YLA|1|I|G|2578
Current chains
- Chain I
- Escherichia coli strain K-12 substr. MG1655_TMP32XR1 chromosome, complete genome
Nearby chains
- Chain 6
- GTPase HflX
- Chain L
- 50S ribosomal protein L3
- Chain i
- 50S ribosomal protein L32
Coloring options: