IL_7YLA_096

3D structure

PDB id

7YLA (explore in PDB, NAKB, or RNA 3D Hub)

Description

Cryo-EM structure of 50S-HflX complex

Experimental method

ELECTRON MICROSCOPY

Resolution

2.52 Å

Loop

Sequence

CG*CAG

Length

5 nucleotides

Bulged bases

7YLA|1|I|A|2602

QA status

Valid loop

Sequence variability

If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.

R3DSVS

Structural variability across Equivalence Class

The link below will give the loop's structural variability across the equivalence class for this chain.

R3DMCS EC

Structural variability across Rfam

If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.

R3DMCS Rfam

IL_7YLA_096 not in the Motif Atlas

Geometric match to IL_4V88_409

Geometric discrepancy: 0.2587

The information below is about IL_4V88_409

Detailed Annotation

Single bulged A

Broad Annotation

No text annotation

Motif group

IL_31462.1

Basepair signature

cWW-L-cWW

Number of instances in this motif group

127

Unit IDs

7YLA|1|I|C|2591
7YLA|1|I|G|2592
*
7YLA|1|I|C|2601
7YLA|1|I|A|2602
7YLA|1|I|G|2603

Current chains

Chain I

Escherichia coli strain K-12 substr. MG1655_TMP32XR1 chromosome, complete genome

Nearby chains

Chain 6

GTPase HflX

Chain K

50S ribosomal protein L2