IL_7YLA_118

3D structure

PDB id

7YLA (explore in PDB, NAKB, or RNA 3D Hub)

Description

Cryo-EM structure of 50S-HflX complex

Experimental method

ELECTRON MICROSCOPY

Resolution

2.52 Å

Loop

Sequence

UUAAUUGAUG*UUGAUCGAAG

Length

20 nucleotides

Bulged bases

None detected

QA status

Valid loop

Sequence variability

If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.

R3DSVS

Structural variability across Equivalence Class

The link below will give the loop's structural variability across the equivalence class for this chain.

R3DMCS EC

Structural variability across Rfam

If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.

R3DMCS Rfam

IL_7YLA_118 not in the Motif Atlas

Homologous match to IL_5J7L_387

Geometric discrepancy: 0.0989

The information below is about IL_5J7L_387

Detailed Annotation

No text annotation

Broad Annotation

No text annotation

Motif group

IL_61249.1

Basepair signature

cWW-L-R-L-R-tHS-cWW-cWW-tSH-tHS-cWW-cWW

Number of instances in this motif group

1

Unit IDs

7YLA|1|I|U|1851
7YLA|1|I|U|1852
7YLA|1|I|A|1853
7YLA|1|I|A|1854
7YLA|1|I|U|1855
7YLA|1|I|U|1856
7YLA|1|I|G|1857
7YLA|1|I|A|1858
7YLA|1|I|U|1859
7YLA|1|I|G|1860
*
7YLA|1|I|U|1882
7YLA|1|I|U|1883
7YLA|1|I|G|1884
7YLA|1|I|A|1885
7YLA|1|I|U|1886
7YLA|1|I|C|1887
7YLA|1|I|G|1888
7YLA|1|I|A|1889
7YLA|1|I|A|1890
7YLA|1|I|G|1891

Current chains

Chain I

Escherichia coli strain K-12 substr. MG1655_TMP32XR1 chromosome, complete genome

Nearby chains