IL_7Z20_053

3D structure

PDB id

7Z20 (explore in PDB, NAKB, or RNA 3D Hub)

Description

70S E. coli ribosome with an extended uL23 loop from Candidatus marinimicrobia and a stalled filamin domain 5 nascent chain

Experimental method

ELECTRON MICROSCOPY

Resolution

2.29 Å

Loop

Sequence

UG*CAUCAG

Length

8 nucleotides

Bulged bases

7Z20|1|b|U|1583

QA status

Valid loop

Sequence variability

If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.

R3DSVS

Structural variability across Equivalence Class

The link below will give the loop's structural variability across the equivalence class for this chain.

R3DMCS EC

Structural variability across Rfam

If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.

R3DMCS Rfam

IL_7Z20_053 not in the Motif Atlas

Geometric match to IL_5J7L_294

Geometric discrepancy: 0.2121

The information below is about IL_5J7L_294

Detailed Annotation

No text annotation

Broad Annotation

No text annotation

Motif group

IL_87211.1

Basepair signature

cWW-cSW-L-cWW-L

Number of instances in this motif group

1

Unit IDs

7Z20|1|b|U|1414
7Z20|1|b|G|1415
*
7Z20|1|b|C|1581
7Z20|1|b|A|1582
7Z20|1|b|U|1583
7Z20|1|b|C|1584
7Z20|1|b|A|1585
7Z20|1|b|G|1586

Current chains

Chain b

23S rRNA

Nearby chains