IL_7Z20_071

3D structure

PDB id

7Z20 (explore in PDB, NAKB, or RNA 3D Hub)

Description

70S E. coli ribosome with an extended uL23 loop from Candidatus marinimicrobia and a stalled filamin domain 5 nascent chain

Experimental method

ELECTRON MICROSCOPY

Resolution

2.29 Å

Loop

Sequence

AC*GCU

Length

5 nucleotides

Bulged bases

7Z20|1|b|C|1731

QA status

Valid loop

Sequence variability

If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.

R3DSVS

Structural variability across Equivalence Class

The link below will give the loop's structural variability across the equivalence class for this chain.

R3DMCS EC

Structural variability across Rfam

If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.

R3DMCS Rfam

IL_7Z20_071 not in the Motif Atlas

Geometric match to IL_3SNP_003

Geometric discrepancy: 0.3626

The information below is about IL_3SNP_003

Detailed Annotation

Single bulged C

Broad Annotation

No text annotation

Motif group

IL_05642.2

Basepair signature

cWW-L-cWW

Number of instances in this motif group

60

Unit IDs

7Z20|1|b|A|1726
7Z20|1|b|C|1727
*
7Z20|1|b|G|1730
7Z20|1|b|C|1731
7Z20|1|b|U|1732

Current chains

Chain b

23S rRNA

Nearby chains