IL_7Z20_079
3D structure
- PDB id
- 7Z20 (explore in PDB, NAKB, or RNA 3D Hub)
- Description
- 70S E. coli ribosome with an extended uL23 loop from Candidatus marinimicrobia and a stalled filamin domain 5 nascent chain
- Experimental method
- ELECTRON MICROSCOPY
- Resolution
- 2.29 Å
Loop
- Sequence
- CGAAAUUCCUUG*CCUG
- Length
- 16 nucleotides
- Bulged bases
- 7Z20|1|b|A|1937, 7Z20|1|b|U|1943, 7Z20|1|b|U|1962
- QA status
- Valid loop
Sequence variability
-
If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.
- R3DSVS
Structural variability across Equivalence Class
-
The link below will give the loop's structural variability across the equivalence class for this chain.
- R3DMCS EC
Structural variability across Rfam
-
If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.
- R3DMCS Rfam
- IL_7Z20_079 not in the Motif Atlas
- Geometric match to IL_7A0S_072
- Geometric discrepancy: 0.1138
- The information below is about IL_7A0S_072
- Detailed Annotation
- No text annotation
- Broad Annotation
- No text annotation
- Motif group
- IL_04332.3
- Basepair signature
- cWW-L-R-L-cWW-L-L-R-L-R-L
- Number of instances in this motif group
- 2
Unit IDs
7Z20|1|b|C|1933
7Z20|1|b|G|1934
7Z20|1|b|A|1935
7Z20|1|b|A|1936
7Z20|1|b|A|1937
7Z20|1|b|U|1938
7Z20|1|b|U|1939
7Z20|1|b|C|1940
7Z20|1|b|C|1941
7Z20|1|b|U|1942
7Z20|1|b|U|1943
7Z20|1|b|G|1944
*
7Z20|1|b|C|1960
7Z20|1|b|C|1961
7Z20|1|b|U|1962
7Z20|1|b|G|1963
Current chains
- Chain b
- 23S rRNA
Nearby chains
- Chain c
- 50S ribosomal protein L2
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