IL_7Z20_086

3D structure

PDB id

7Z20 (explore in PDB, NAKB, or RNA 3D Hub)

Description

70S E. coli ribosome with an extended uL23 loop from Candidatus marinimicrobia and a stalled filamin domain 5 nascent chain

Experimental method

ELECTRON MICROSCOPY

Resolution

2.29 Å

Loop

Sequence

CCUUGAUGUGUAGGAUAGG*CCCUUUAAUG

Length

29 nucleotides

Bulged bases

7Z20|1|b|U|2110, 7Z20|1|b|G|2115, 7Z20|1|b|U|2117, 7Z20|1|b|C|2177

QA status

Valid loop

Sequence variability

If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.

R3DSVS

Structural variability across Equivalence Class

The link below will give the loop's structural variability across the equivalence class for this chain.

R3DMCS EC

Structural variability across Rfam

If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.

R3DMCS Rfam

Detailed Annotation

No text annotation

Broad Annotation

No text annotation

Motif group

Not in a motif group

Basepair signature

Not available

Number of instances in this motif group

0

Unit IDs

7Z20|1|b|C|2102
7Z20|1|b|C|2103
7Z20|1|b|U|2104
7Z20|1|b|U|2105
7Z20|1|b|G|2106
7Z20|1|b|A|2107
7Z20|1|b|U|2108
7Z20|1|b|G|2109
7Z20|1|b|U|2110
7Z20|1|b|G|2111
7Z20|1|b|U|2112
7Z20|1|b|A|2113
7Z20|1|b|G|2114
7Z20|1|b|G|2115
7Z20|1|b|A|2116
7Z20|1|b|U|2117
7Z20|1|b|A|2118
7Z20|1|b|G|2119
7Z20|1|b|G|2120
*
7Z20|1|b|C|2176
7Z20|1|b|C|2177
7Z20|1|b|C|2178
7Z20|1|b|U|2179
7Z20|1|b|U|2180
7Z20|1|b|U|2181
7Z20|1|b|A|2182
7Z20|1|b|A|2183
7Z20|1|b|U|2184
7Z20|1|b|G|2185

Current chains

Chain b

23S rRNA

Nearby chains