3D structure

PDB id
7Z34 (explore in PDB, NAKB, or RNA 3D Hub)
Description
Structure of pre-60S particle bound to DRG1(AFG2)
Experimental method
ELECTRON MICROSCOPY
Resolution
3.8 Å

Loop

Sequence
GGAAUGUAGC*GUAUUAUAGCC
Length
21 nucleotides
Bulged bases
7Z34|1|1|U|534, 7Z34|1|1|U|558
QA status
Valid loop

Sequence variability

If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.
R3DSVS

Structural variability across Equivalence Class

The link below will give the loop's structural variability across the equivalence class for this chain.
R3DMCS EC

Structural variability across Rfam

If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.
R3DMCS Rfam
Detailed Annotation
No text annotation
Broad Annotation
No text annotation
Motif group
Not in a motif group
Basepair signature
Not available
Number of instances in this motif group
0

Unit IDs

7Z34|1|1|G|530
7Z34|1|1|G|531
7Z34|1|1|A|532
7Z34|1|1|A|533
7Z34|1|1|U|534
7Z34|1|1|G|535
7Z34|1|1|U|536
7Z34|1|1|A|537
7Z34|1|1|G|538
7Z34|1|1|C|539
*
7Z34|1|1|G|552
7Z34|1|1|U|553
7Z34|1|1|A|554
7Z34|1|1|U|555
7Z34|1|1|U|556
7Z34|1|1|A|557
7Z34|1|1|U|558
7Z34|1|1|A|559
7Z34|1|1|G|560
7Z34|1|1|C|561
7Z34|1|1|C|562

Current chains

Chain 1
35S pre-ribosomal RNA

Nearby chains

Chain M
60S ribosomal protein L14-A
Chain S
60S ribosomal protein L20-A
Chain W
Ribosome assembly factor MRT4

Coloring options:

Copyright 2025 BGSU RNA group. Page generated in 0.1196 s