IL_7Z34_060

3D structure

PDB id

7Z34 (explore in PDB, NAKB, or RNA 3D Hub)

Description

Structure of pre-60S particle bound to DRG1(AFG2)

Experimental method

ELECTRON MICROSCOPY

Resolution

3.8 Å

Loop

Sequence

CC*GUG

Length

5 nucleotides

Bulged bases

None detected

QA status

Unknown status

Sequence variability

If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.

R3DSVS

Structural variability across Equivalence Class

The link below will give the loop's structural variability across the equivalence class for this chain.

R3DMCS EC

Structural variability across Rfam

If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.

R3DMCS Rfam

IL_7Z34_060 not in the Motif Atlas

Geometric match to IL_4WF9_007

Geometric discrepancy: 0.1745

The information below is about IL_4WF9_007

Detailed Annotation

Single stack bend

Broad Annotation

No text annotation

Motif group

IL_15011.1

Basepair signature

cWW-L-cWW

Number of instances in this motif group

48

Unit IDs

7Z34|1|1|C|1670
7Z34|1|1|C|1671
*
7Z34|1|1|G|1776
7Z34|1|1|U|1777
7Z34|1|1|G|1778

Current chains

Chain 1

35S pre-ribosomal RNA

Nearby chains

Chain R

60S ribosomal protein L19-A

Chain g

60S ribosomal protein L34-A