IL_7Z34_066
3D structure
- PDB id
- 7Z34 (explore in PDB, NAKB, or RNA 3D Hub)
- Description
- Structure of pre-60S particle bound to DRG1(AFG2)
- Experimental method
- ELECTRON MICROSCOPY
- Resolution
- 3.8 Å
Loop
- Sequence
- GGAAGUCGG*CUGUC
- Length
- 14 nucleotides
- Bulged bases
- 7Z34|1|1|U|1903, 7Z34|1|1|G|2335
- QA status
- Valid loop
Sequence variability
-
If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.
- R3DSVS
Structural variability across Equivalence Class
-
The link below will give the loop's structural variability across the equivalence class for this chain.
- R3DMCS EC
Structural variability across Rfam
-
If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.
- R3DMCS Rfam
- IL_7Z34_066 not in the Motif Atlas
- Homologous match to IL_8C3A_484
- Geometric discrepancy: 0.3822
- The information below is about IL_8C3A_484
- Detailed Annotation
- No text annotation
- Broad Annotation
- No text annotation
- Motif group
- IL_04332.2
- Basepair signature
- cWW-cWW-L-cWW-L-R-L-R-L-L
- Number of instances in this motif group
- 3
Unit IDs
7Z34|1|1|G|1898
7Z34|1|1|G|1899
7Z34|1|1|A|1900
7Z34|1|1|A|1901
7Z34|1|1|G|1902
7Z34|1|1|U|1903
7Z34|1|1|C|1904
7Z34|1|1|G|1905
7Z34|1|1|G|1906
*
7Z34|1|1|C|2333
7Z34|1|1|U|2334
7Z34|1|1|G|2335
7Z34|1|1|U|2336
7Z34|1|1|C|2337
Current chains
- Chain 1
- 35S pre-ribosomal RNA
Nearby chains
- Chain B
- 60S ribosomal protein L3
- Chain I
- Bud site selection protein 20
- Chain V
- 60S ribosomal protein L23-A
Coloring options: