IL_7Z34_093

3D structure

PDB id

7Z34 (explore in PDB, NAKB, or RNA 3D Hub)

Description

Structure of pre-60S particle bound to DRG1(AFG2)

Experimental method

ELECTRON MICROSCOPY

Resolution

3.8 Å

Loop

Sequence

GA*UAC

Length

5 nucleotides

Bulged bases

None detected

QA status

Valid loop

Sequence variability

If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.

R3DSVS

Structural variability across Equivalence Class

The link below will give the loop's structural variability across the equivalence class for this chain.

R3DMCS EC

Structural variability across Rfam

If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.

R3DMCS Rfam

IL_7Z34_093 not in the Motif Atlas

Geometric match to IL_4V9F_081

Geometric discrepancy: 0.3078

The information below is about IL_4V9F_081

Detailed Annotation

Single stack bend

Broad Annotation

No text annotation

Motif group

IL_26793.1

Basepair signature

cWW-L-cWW

Number of instances in this motif group

16

Unit IDs

7Z34|1|1|G|2720
7Z34|1|1|A|2721
*
7Z34|1|1|U|2735
7Z34|1|1|A|2736
7Z34|1|1|C|2737

Current chains

Chain 1

35S pre-ribosomal RNA

Nearby chains

Chain Q

60S ribosomal protein L18-A

Chain T

60S ribosomal protein L21-A

Chain o

60S ribosomal protein L29