3D structure

PDB id
7Z34 (explore in PDB, NAKB, or RNA 3D Hub)
Description
Structure of pre-60S particle bound to DRG1(AFG2)
Experimental method
ELECTRON MICROSCOPY
Resolution
3.8 Å

Loop

Sequence
GCUCU*AACGUGAGC
Length
14 nucleotides
Bulged bases
7Z34|1|1|A|2941, 7Z34|1|1|C|2942, 7Z34|1|1|G|2945, 7Z34|1|1|A|2946
QA status
Valid loop

Sequence variability

If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.
R3DSVS

Structural variability across Equivalence Class

The link below will give the loop's structural variability across the equivalence class for this chain.
R3DMCS EC

Structural variability across Rfam

If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.
R3DMCS Rfam
Detailed Annotation
No text annotation
Broad Annotation
No text annotation
Motif group
Not in a motif group
Basepair signature
Not available
Number of instances in this motif group
0

Unit IDs

7Z34|1|1|G|2878
7Z34|1|1|C|2879
7Z34|1|1|U|2880
7Z34|1|1|C|2881
7Z34|1|1|U|2882
*
7Z34|1|1|A|2940
7Z34|1|1|A|2941
7Z34|1|1|C|2942
7Z34|1|1|G|2943
7Z34|1|1|U|2944
7Z34|1|1|G|2945
7Z34|1|1|A|2946
7Z34|1|1|G|2947
7Z34|1|1|C|2948

Current chains

Chain 1
35S pre-ribosomal RNA

Nearby chains

Chain B
60S ribosomal protein L3
Chain V
60S ribosomal protein L23-A
Chain b
Nucleolar GTP-binding protein 1

Coloring options:

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