IL_7Z34_104

3D structure

PDB id

7Z34 (explore in PDB, NAKB, or RNA 3D Hub)

Description

Structure of pre-60S particle bound to DRG1(AFG2)

Experimental method

ELECTRON MICROSCOPY

Resolution

3.8 Å

Loop

Sequence

AUUAUGG*UCAGAAU

Length

14 nucleotides

Bulged bases

7Z34|1|1|A|3130

QA status

Valid loop

Sequence variability

If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.

R3DSVS

Structural variability across Equivalence Class

The link below will give the loop's structural variability across the equivalence class for this chain.

R3DMCS EC

Structural variability across Rfam

If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.

R3DMCS Rfam

Detailed Annotation

No text annotation

Broad Annotation

No text annotation

Motif group

Not in a motif group

Basepair signature

Not available

Number of instances in this motif group

0

Unit IDs

7Z34|1|1|A|3103
7Z34|1|1|U|3104
7Z34|1|1|U|3105
7Z34|1|1|A|3106
7Z34|1|1|U|3107
7Z34|1|1|G|3108
7Z34|1|1|G|3109
*
7Z34|1|1|U|3125
7Z34|1|1|C|3126
7Z34|1|1|A|3127
7Z34|1|1|G|3128
7Z34|1|1|A|3129
7Z34|1|1|A|3130
7Z34|1|1|U|3131

Current chains

Chain 1

35S pre-ribosomal RNA

Nearby chains

Chain H

60S ribosomal protein L9-A

Chain O

60S ribosomal protein L16-A

Chain r

Ribosome biogenesis protein NSA2

Chain z

UPF0642 protein YBL028C