IL_7Z34_127
3D structure
- PDB id
- 7Z34 (explore in PDB, NAKB, or RNA 3D Hub)
- Description
- Structure of pre-60S particle bound to DRG1(AFG2)
- Experimental method
- ELECTRON MICROSCOPY
- Resolution
- 3.8 Å
Loop
- Sequence
- UGAACUU*AUCAAUAA
- Length
- 15 nucleotides
- Bulged bases
- 7Z34|1|1|A|49
- QA status
- Valid loop
Sequence variability
-
If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.
- R3DSVS
Structural variability across Equivalence Class
-
The link below will give the loop's structural variability across the equivalence class for this chain.
- R3DMCS EC
Structural variability across Rfam
-
If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.
- R3DMCS Rfam
- IL_7Z34_127 not in the Motif Atlas
- Geometric match to IL_4V9F_006
- Geometric discrepancy: 0.2849
- The information below is about IL_4V9F_006
- Detailed Annotation
- 8x7 Sarcin-Ricin; G-bulge
- Broad Annotation
- Sarcin-Ricin; G-bulge
- Motif group
- IL_62167.1
- Basepair signature
- cWW-cWW-tSH-tHH-cSH-tWH-tHS-cWW
- Number of instances in this motif group
- 18
Unit IDs
7Z34|1|1|U|32
7Z34|1|1|G|33
7Z34|1|1|A|34
7Z34|1|1|A|35
7Z34|1|1|C|36
7Z34|1|1|U|37
7Z34|1|1|U|38
*
7Z34|1|1|A|45
7Z34|1|1|U|46
7Z34|1|1|C|47
7Z34|1|1|A|48
7Z34|1|1|A|49
7Z34|1|1|U|50
7Z34|1|1|A|51
7Z34|1|1|A|52
Current chains
- Chain 1
- 35S pre-ribosomal RNA
Nearby chains
- Chain K
- 60S ribosomal protein L28
- Chain L
- 60S ribosomal protein L13-A
- Chain N
- 60S ribosomal protein L15-A
- Chain j
- 60S ribosomal protein L37-A
- Chain q
- 60S ribosomal protein L42-A
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