IL_7Z34_130
3D structure
- PDB id
- 7Z34 (explore in PDB, NAKB, or RNA 3D Hub)
- Description
- Structure of pre-60S particle bound to DRG1(AFG2)
- Experimental method
- ELECTRON MICROSCOPY
- Resolution
- 3.8 Å
Loop
- Sequence
- GGUG*CAGCU
- Length
- 9 nucleotides
- Bulged bases
- 7Z34|1|1|A|578
- QA status
- Valid loop
Sequence variability
-
If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.
- R3DSVS
Structural variability across Equivalence Class
-
The link below will give the loop's structural variability across the equivalence class for this chain.
- R3DMCS EC
Structural variability across Rfam
-
If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.
- R3DMCS Rfam
- IL_7Z34_130 not in the Motif Atlas
- Geometric match to IL_4EYA_008
- Geometric discrepancy: 0.2297
- The information below is about IL_4EYA_008
- Detailed Annotation
- Tandem non-canonical cWW pairs
- Broad Annotation
- No text annotation
- Motif group
- IL_15225.1
- Basepair signature
- cWW-cWW-cWW-cWW
- Number of instances in this motif group
- 33
Unit IDs
7Z34|1|1|G|510
7Z34|1|1|G|511
7Z34|1|1|U|512
7Z34|1|1|G|513
*
7Z34|1|1|C|577
7Z34|1|1|A|578
7Z34|1|1|G|579
7Z34|1|1|C|580
7Z34|1|1|U|581
Current chains
- Chain 1
- 35S pre-ribosomal RNA
Nearby chains
- Chain C
- 60S ribosomal protein L4-A
- Chain F
- 60S ribosomal protein L7-A
- Chain f
- 60S ribosomal protein L33-A
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