IL_7Z34_132
3D structure
- PDB id
- 7Z34 (explore in PDB, NAKB, or RNA 3D Hub)
- Description
- Structure of pre-60S particle bound to DRG1(AFG2)
- Experimental method
- ELECTRON MICROSCOPY
- Resolution
- 3.8 Å
Loop
- Sequence
- GAGGUAAAGCGAAUGAUUAGAGGUUCCGGG*CUUGACCUAUUCUCAAACUUUAAAUAU
- Length
- 57 nucleotides
- Bulged bases
- 7Z34|1|1|A|998, 7Z34|1|1|G|1001, 7Z34|1|1|A|1002, 7Z34|1|1|A|1009, 7Z34|1|1|G|1013, 7Z34|1|1|U|1014, 7Z34|1|1|U|1015, 7Z34|1|1|C|1016, 7Z34|1|1|U|1034, 7Z34|1|1|G|1035, 7Z34|1|1|C|1038, 7Z34|1|1|U|1042, 7Z34|1|1|C|1043
- QA status
- Valid loop
Sequence variability
-
If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.
- R3DSVS
Structural variability across Equivalence Class
-
The link below will give the loop's structural variability across the equivalence class for this chain.
- R3DMCS EC
Structural variability across Rfam
-
If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.
- R3DMCS Rfam
- Detailed Annotation
- No text annotation
- Broad Annotation
- No text annotation
- Motif group
- Not in a motif group
- Basepair signature
- Not available
- Number of instances in this motif group
- 0
Unit IDs
7Z34|1|1|G|991
7Z34|1|1|A|992
7Z34|1|1|G|993
7Z34|1|1|G|994
7Z34|1|1|U|995
7Z34|1|1|A|996
7Z34|1|1|A|997
7Z34|1|1|A|998
7Z34|1|1|G|999
7Z34|1|1|C|1000
7Z34|1|1|G|1001
7Z34|1|1|A|1002
7Z34|1|1|A|1003
7Z34|1|1|U|1004
7Z34|1|1|G|1005
7Z34|1|1|A|1006
7Z34|1|1|U|1007
7Z34|1|1|U|1008
7Z34|1|1|A|1009
7Z34|1|1|G|1010
7Z34|1|1|A|1011
7Z34|1|1|G|1012
7Z34|1|1|G|1013
7Z34|1|1|U|1014
7Z34|1|1|U|1015
7Z34|1|1|C|1016
7Z34|1|1|C|1017
7Z34|1|1|G|1018
7Z34|1|1|G|1019
7Z34|1|1|G|1020
*
7Z34|1|1|C|1032
7Z34|1|1|U|1033
7Z34|1|1|U|1034
7Z34|1|1|G|1035
7Z34|1|1|A|1036
7Z34|1|1|C|1037
7Z34|1|1|C|1038
7Z34|1|1|U|1039
7Z34|1|1|A|1040
7Z34|1|1|U|1041
7Z34|1|1|U|1042
7Z34|1|1|C|1043
7Z34|1|1|U|1044
7Z34|1|1|C|1045
7Z34|1|1|A|1046
7Z34|1|1|A|1047
7Z34|1|1|A|1048
7Z34|1|1|C|1049
7Z34|1|1|U|1050
7Z34|1|1|U|1051
7Z34|1|1|U|1052
7Z34|1|1|A|1053
7Z34|1|1|A|1054
7Z34|1|1|A|1055
7Z34|1|1|U|1056
7Z34|1|1|A|1057
7Z34|1|1|U|1058
Current chains
- Chain 1
- 35S pre-ribosomal RNA
Nearby chains
- Chain 2
- 5S ribosomal RNA; 5S rRNA
- Chain D
- 60S ribosomal protein L5
- Chain F
- 60S ribosomal protein L7-A
- Chain J
- 60S ribosomal protein L11-A
- Chain T
- 60S ribosomal protein L21-A
- Chain v
- 60S ribosomal export protein NMD3
Coloring options: